This software uses artificial intelligence (AI) techniques to create high-resolution maps, or atlases, of the brain's network of neurons from high-dimensional biomedical data. NeuroTrALE addresses a major challenge in AI-assisted brain mapping: a lack of labeled data for training AI systems to build atlases essential for study of the brain's neural structures and mechanisms. The software is the first end-to-end system to perform processing and annotation of dense microscopy data; generate segmentations of neurons; and enable experts to review, correct, and edit NeuroTrALE's annotations from a web browser. This award is shared with the MIT Chung Lab. |