HUPOST Editor: Ben Garcia | Staff Editor: Shelli Bourne | April 2023
HUPO 2023 Registration, Abstract and Travel Award Submissions Now Open!
 
Registration as well as abstract and travel award submission for HUPO 2023 in Busan, South Korea are now open. We cordially invite you to register and submit abstracts for one of the largest international gatherings in the field of proteomics. The Scientific Program Committee has organized extraordinary Plenary and Keynote Speakers across an exciting range of proteomics topics. The program-at-a-glance and many other congress details can be found on the HUPO 2023 congress website.
 
Confirmed speakers include Yu-Ju Chen, Jennifer Geddes-McAlister, Matthias Mann, Neil Kelleher, Lingjun Li, Jeremy Nicholson and Hee-Sup Shin, and many more exceptional scientists. Topics will cover AI and Bioinformatics, Cell Biology, Epigenetics and Aging, Glycoproteomics, and Standardization and Harmonization to name a few. Stay tuned for more exciting science.
 
Also take a moment to view these important congress elements and upcoming deadlines:

1.   Pre-Congress Activities (Sunday, September 17):
  • Pre-congress Training Courses, a great chance to learn from the experts. The courses include Proteomics 101, Single Cell Proteomics, Protein Interactions and Spatial Proteomics, and Computational Proteomics and Bioinformatics
  • Big Questions in Proteomics Sessions, The HUPO 2023 Core Committee invites submissions from individuals or groups to conduct “Big Questions in Proteomics” Sessions. This is your chance to actively influence the content presented at HUPO 2023. Session proposal deadline: April 20. More details here.

2.   Travel Awards for trainees and a new award for non-commercial senior scientists – Application Deadline: May 26, 2023
 
Book Your Accommodation Early!
There are many hotels within close walking or driving distance to the BEXCO convention center. The HUPO 2023 congress block has excellent rates for the two hotels within walking distance – book early to secure your room!
 
More details about hotel accommodation here.
  
Important Upcoming Dates
  • April 20, 2023 (23:59 PST): Session Proposal Deadline for Pre-Congress Sessions “Big Questions in Proteomics”
  • May 26, 2023 (23:59 PST): Abstract Submission and Travel Award Application Deadline
  • June 28, 2023: Abstract Notifications and Travel Award Notifications
  • July 14, 2023 (23:59 PST): Early Registration Deadline
  • August 11, 2023 (23:59 PST): Regular Registration & Accommodation Booking Deadline
 
Visit Busan Pass
For sightseeing in Busan, there is a ‘Visit Busan Pass,’ available which offers entrance to 30 tourist destinations and prepaid public transportation. This Pass has 2 types of cards:
  • 24-Hour (KRW 49,000/USD 40)
  • 48-Hour(KRW 69,000/USD 53)

In addition, the physical card is a rechargeable transportation card and is designed with beautiful graphics of Busan. It is a wonderful keepsake depicting the beauty of Busan and your journey in Korea.
 
2023 HUPO Awards Nominations Opening Soon!

  • Science and Technology Award
  • Distinguished Achievement in Proteomic Sciences Award
  • Clinical and Translational Proteomics Award
  • Discovery in Proteomic Sciences Award
  • Rising Star Award
  • Distinguished Service Award

Join Us for Our Next Online Panel on Exploring Non-Academic Career Pathways
Interested in proteomics? Considering a non-academic career?
Join the next HUPO ECR online panel discussion on “Exploring non-academic pathways in proteomics” at 5 pm GMT on Wednesday April 5th. The panel will feature Dr.of Chris Rose (Scientist and Postdoc Mentor, Genentech), Dr. Lindsay Pino (Co-founder and CTO, Talus Bio) and Dr. Maria Polychronidou (Senior Scientific Editor, Molecular Systems Biology, EMBO Press). This will be the perfect occasion to ask questions you may have about starting a career in the industry or publishing world! 
Last Call for the 2023 HUPO Early Career Researcher Manuscript Competition
Sponsored By: Expert Review of Proteomics by Taylor and Francis!
Have you recently worked on an original manuscript in the field of proteomics? This is the last chance to participate in the 9th edition of the HUPO Early Career Researcher (ECR) Manuscript Competition at HUPO 2023. This is a unique opportunity for early career researchers to gain visibility in the proteomics community, as it highlights the important contributions that postdoctoral fellows, young clinicians and junior faculty members make to the proteomics field. Three finalists will be selected to present their manuscripts published during the 2022 and 2023 calendar years in a dedicated plenary session at HUPO 2023. An expert committee will evaluate the oral presentations to determine the “Proteomics Highlight of the Year”. The first-place winner will receive a cash prize of $1,000 USD and two runner-ups will each take home $500 USD, thanks to our sponsor Expert Review of Proteomics by Taylor and Francis.

Unsure about applying? Hear from last year’s finalists, Dr. Ling Hao and Dr. Wout Bittremieux about their experience at HUPO 2022 in Cancun, Mexico.

Deadline to apply: April 15th, 2023
 
More information about the competition, eligibility and how to submit available here.
Submit your Abstract and Participate in the Poster Competition at HUPO 2023 in Busan
Sponsored by: Molecular Omics
The HUPO Early Career Researcher Committee is excited to present this year’s Poster Competition. All graduate students (Master’s and PhD), as well as Postdocs, are invited to participate in the HUPO 2023 poster competition taking place September 17-21, 2023 in Busan, South Korea.

To participate, graduate students and postdocs simply need to indicate in their abstract submission if they would like to participate in the competition. This can be done by clicking the appropriate box while completing your submission. A set of posters will be selected as finalists and be evaluated during the conference by a jury.

Winners in both categories (graduate students and postdocs) will each receive cash prizes. Best of luck to all! 
Wednesday, April 12, 2023
9:00 am CDT
Writing a successful grant application is hard work—regardless of your career level. Once you've convinced yourself that you have a compelling research project, you have to find a way to convince the reviewers and then the funding agency to support you. This webinar will cover fundamental essentials of a successful research proposal, including choice of grant category, PI and collaborators/co-investigators in addition to writing style, organization, and documentation. Guidance about shared instrumentation grant applications will also be presented.

SPEAKER: Dr. Weintraub has been been actively engaged in biomedical mass spectrometry since 1971. She is a co-author of more than 180 scientific papers published in peer-reviewed journals in addition to six book chapters.

Summary of 3rd ETC Auditorium with Ruedi Aebersold:
"Career Advancement is Dependent on Paper Writing'

The goal of the ETC Auditorium "Stylish Academic Writing" professional development webinar series is to help students and trainees improve their scientific writing skills. The 3rd event featured Ruedi Aebersold from ETH Zurich, Switzerland. Prof. Ruedi Aebersold is an emeritus Professor at ETH Zurich who is an international leader in proteomics field and mentored many scientists. Ruedi's lab has pioneered several widely-used techniques and tools that have contributed to today's proteomics research. His publications have been cited 196,000 times with an h-factor of 214, according to Google Scholar.

HBPP Workshop – May 21-23, 2023
Sao Paulo, Brazil

The Human Brain Proteome Project (HBPP) launched in 2003 and was redesigned in 2015 to promote the connection of neuroproteomics scientists and actively encourage the inclusion of young investigators. Our well-established annual HBPP workshop has been travelling around the world to capture, congregate, and connect the international neuroproteomics community. This workshop will provide a forum for researchers to meet and discuss the latest developments in neuroproteomic research to better understand brain function and dysfunction. 

Visit hbpp2023 for more information, program, speaker and registration details.
FragPipe Enables One-Stop Data Analysis for Bottom-Up Proteomics

Written by: Fengchao Yu and Daniel A. Polasky, University of Michigan, USA

Mass spectrometry-based proteomics is a widely used technique to study peptides and proteins quantitatively. This approach has several advantages over other techniques, such as high throughput and sensitivity. However, the data analysis process is challenging, due to the complexity of tandem MS data and wide variety of experiments and workflows under the umbrella of proteomics. To overcome these challenges, various tools have been developed to process mass spectrometry data. Unfortunately, these tools typically focus on specific aspects of data analysis, such as peptide identification, protein identification, or quantification, requiring researchers to learn and “link” multiple tools to complete the analysis. Such a process can be time-consuming and often requires specialized knowledge, limiting the growth of proteomics in the broader research community. Complete, user-friendly software suites for proteomics have been developed commercially, but are expensive and may have limited capability to be adapted to new methods and applications. Aiming to strike a balance in this space, FragPipe is an open-source and freely available graphical user interface (GUI)-based software suite that provides a one-stop solution to streamline the processing of proteomics data from raw data to result tables.

Use Protein and Peptide Data Measurements from Parkinson's Disease Patients to Predict Progression of the Disease

Goal of the Competition:
The goal of this competition is to predict MDS-UPDR scores, which measure progression in patients with Parkinson's disease. The Movement Disorder Society-Sponsored Revision of the Unified Parkinson's Disease Rating Scale (MDS-UPDRS) is a comprehensive assessment of both motor and non-motor symptoms associated with Parkinson's. You will develop a model trained on data of protein and peptide levels over time in subjects with Parkinson’s disease versus normal age-matched control subjects.

Your work could help provide important breakthrough information about which molecules change as Parkinson’s disease progresses.

New from Microbiology Resource Announcements® (MRA)
MRA announces its first-ever call for proteomics datasets. Proteomics Editors Jennifer Geddes-McAlister (University of Guelph) and Matthew M. Champion (University of Notre Dame) invite you to share microbial proteomic datasets from all areas of microbial sciences, including basic, applied, environmental and clinical microbiology as a Proteomics Resource Announcement in this fully open-access journal from ASM.

Explore the Call for Papers page to learn more and submit your paper. 
Characterisation of Post-Translational Modifications in Cellular Signalling - June 15-22, 2023

This EMBO practical course aims to provide a theoretical and practical overview of state-of-the-art techniques for the characterization of various PTMs, such as phosphorylation, acetylation, cysteine PTMs and glycosylation, and their cross-talking in controlling dynamic cellular mechanisms. 

Each month a member of HUPO is highlighted. A diverse group of researchers representing different career stages, disciplines, geographical locations, and ethnicities are invited to submit a profile for the monthly highlight. This initiative will improve visibility of HUPO members, advertise research and enhance the HUPO community. This month we are featuring:
Albert Heck, Netherlands

What is your current position and location?
Since 2017 I have been a Distinguished Professor at the Science Faculty of Utrecht University in the Netherlands (www.hecklab.com). I started in Utrecht the Biomolecular Mass Spectrometry & Proteomics group in 1998, when just a few people knew how to spell the word proteomics, and we relied on 2D gels and peptide-mass-finger printing.

How did you get started in the field of proteomics?
I got trained in physical chemistry and started in the field of mass spectrometry through graduate research in the lab of Nico Nibbering at the University of Amsterdam. For a post-doc I went into laser spectroscopy and molecular beams, with David Chandler at Sandia and Dick Zare at Stanford. In 1995 I was attracted to Warwick University in the UK and started to work as a Lecturer on the analysis of peptides and proteins by mass spectrometry. In my job application for Utrecht in 1997 I did write down a big dream of what I believed mass spectrometry could deliver in the life sciences, and seemingly was able to convince the recruitment committee. We had to learn how to run gels, do nanoLC and manually interpret fragmentation spectra. And yes, all the dreams I put forward have come true, some even earlier than expected.

The job board on the HUPO website is a valuable resource for both employers and individuals seeking ideas and opportunities. See the latest job postings here!

If you have a job posting and would like to advertise it, send your information to office@hupo.org and we'll post it for you. For more information and job listing details - visit the website here.
Disclaimer. HUPOST provides general information for subscribers. Submissions are welcomed from HUPO members. Articles are to be submitted to HUPO office by 20th of each month (date subject to change without notice) for review by the Editor for suitability. HUPO assumes no liability for errors or omissions in the contents.
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