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IMBeR IPO-China 信息速递

Your news from the Integrated Marine Biosphere Research International Project Office - China


IMBeR欢迎五位新任科学指导委员会成员

IMBeR welcomes five new Scientific Steering Committee members

August 2023,

No. 37

IMBeR及其资助部门资讯

IMBeR and Its Sponsors' Announcements

In This Issue


Cover News

-IMBeR welcomes five new Scientific Steering Committee members

---------------------------IMBeR and Its Sponsors Announcements

-EO-WPI online training: Session #3. 26 September

-Save the new dates for IMBeR's IMBIZO7 conference 23-26 September 2024 in Rabat, Morocco

-Deadline Extended – IMBeR is soliciting offers to host one of its International Project Offices from March 2024 to continue the role fulfilled by IPO-Canada

-Malaysia Young researcher Jenny Choo Cheng Yi was invited to participate South and Southeast Asian Young Talents China’s Trip, click to know more about her trip. (Jenny participated the IMBeR West Pacific Symposium 2021, and was recommended by IMBeR IPO-China and SKLEC for this event)

-SCOR 2023 Annual Meeting

-Webinar: EO researchers in Future Earth

-Join the Earth Observations Researcher Group 

---------------------------Editor Picks

-New Publications

---------------------------

Events, Webinars and Conferences

---------------------------

Jobs and Opportunities

Quick Link

IMBeR Homepage

IPO-China Website

IMBeR Youku Channel

Follow Wechat

“拓展地球观测数据应用,赋能西北太平洋和印太海域海洋生物圈

应对气候变化”(EO-WPI)项目线上培训:第3场活动 将于 2023年9月26日 举行

EO-WPI online training: Session #3. 26 September 2023

第七届 IMBeR IMBIZO会议 将于2024年9月23至26日 在摩洛哥拉巴特举行

Save the new dates for IMBeR's IMBIZO7 conference 23-26 September 2024 in Rabat, Morocco

截止日期延长 - IMBeR招募新的国际项目办公室(IPO),作为两个IPO之一,自2024年3月起接替IPO-Canada职责

Deadline Extended – IMBeR is soliciting offers to host one of its International Project Offices from March 2024 to continue the role fulfilled by IPO-Canada

马来西亚青年学者 Jenny Choo Cheng Yi 受邀参加“南亚东南亚国家青年科学家创新中国行”活动,点击了解她的行程心得分享(Jenny曾参加2021年IMBeR西太平洋研讨会,其受邀参加本次活动由IMBeR IPO-China与SKLEC共同推荐)

Malaysia Young researcher Jenny Choo Cheng Yi was invited to participate South and Southeast Asian Young Talents China’s Trip, click to know more about her trip. (Jenny participated the IMBeR West Pacific Symposium 2021, and was recommended by IMBeR IPO-China and SKLEC for this event)

国际海洋研究委员会(SCOR)2023年年会将于10月17至19日在厄瓜多尔瓜亚基尔和线上举行

Scientific Committee on Oceanic Research (SCOR) 2023 Annual Meeting, 17-19 October 2023, Guayaquil, Ecuador and online

未来地球(Future Earth)框架内地球观测(EO)研究人员线上研讨会将于 9月7日 举行

Webinar: EO researchers at Future Earth, online, 7 September



点击加入地球观测研究人员工作组

Join the Earth Observations Researcher Group 

IMBeR International Project Office - China is fully sponsored by

主编精选

Editor Picks

IMBeR is a Large-Scale Ocean Research Project under SCOR and a Global Research Project under Future Earth

Editors: GiHoon HONG, Fang ZUO, Kai QIN from IMBeR IPO

深海浮霉状菌(Planctomycetes)的首个

厌氧培养代表的生理和代谢洞察

Physiological and Metabolic Insights into the First Cultured Anaerobic Representative of Deep-Sea Planctomycetes Bacteria

作者:Rikuan Zheng, Chong Wang, Rui Liu, Ruining Cai and Chaomin Sun

期刊:BioRxiv


浮霉状菌Planctomycetes)广泛分布在各种生物圈,并在全球元素循环中起到关键作用。然而,很少有深海浮霉状菌被培养出来,这限制了我们对深海生物圈中浮霉状菌的了解。作者通过使用添加利福平和不同氮源的富集培养基,成功地培养了一种来自冷泉沉积物的浮霉状菌新菌株(菌株ZRK32)。基因组、生理和系统发育分析表明,菌株ZRK32是一个新的物种,作者建议命名为: Poriferisphaera heterotrophicis。作者发现菌株ZRK32采用出芽分裂的分裂方式进行复制。基于生长测定和转录组分析的综合结果,作者发现添加富含营养的物质或NO3-或NH4+通过三羧酸(TCA)循环和醣酵解路径(Embden-Meyerhof-Parnas,EMP)促进了能量的产生,从而促进了菌株ZRK32的生长。此外,添加NO3-或NH4+诱导菌株ZRK32以慢性方式释放出一种噬菌体,而不裂解宿主细胞。这种噬菌体随后使菌株ZRK32和作者研究的另一种海洋细菌通过辅助代谢基因(auxiliary metabolic genes,AMGs)的功能来代谢氮。总的来说,这些发现扩展了我们对深海浮霉状菌的理解,同时突显了它们在被慢性病毒重编程时代谢氮的能力。

点击阅览文章全文

(实习生闻静编译)

Fig. 1 The mode of cell division utilized by P. heterotrophicis ZRK32.

(A) Ultrathin TEM sections showing the process of polar budding division (panels 1-8) in strain ZRK32. Images representing the different phases of cell division are shown. Scale bars are 200 nm in panels A and B. (B) The proposed model of cell division of strain ZRK32 based on the TEM observation shown in panel B. The numbers in panels A and B correspond to the same phase of division. (C) Transcriptomics-based heat map showing the differentially expressed genes that encode different key proteins associated with cell division in strain ZRK32. The numbers in panel A represent the fold change of gene expression (by using the log2 value).

Planctomycetes bacteria are ubiquitously distributed across various biospheres and play key roles in global element cycles. However, few deep-sea Planctomycetes members have been cultivated, limiting our understanding of Planctomycetes in the deep biosphere. Here, we have successfully cultured a novel strain of Planctomycetes (strain ZRK32) from a cold seep sediment, by using an enriched medium supplemented with rifampicin and different sources of nitrogen. Our genomic, physiological and phylogenetic analyses indicate that strain ZRK32 is a novel species, which we propose be named: Poriferisphaera heterotrophicis. We show that strain ZRK32 replicates using a budding mode of division. Based on the combined results from growth assays and transcriptomic analyses, we found that rich nutrients, or supplementation with NO3- or NH4+ promoted the growth of strain ZRK32 by facilitating energy production through the tricarboxylic acid (TCA) cycle and the Embden–Meyerhof–Parnas (EMP) glycolysis pathway. Moreover, supplementation with NO3- or NH4+ induced strain ZRK32 to release a bacteriophage in a chronic manner, without host cell lysis. This bacteriophage then enabled strain ZRK32, and another marine bacterium that we studied, to metabolize nitrogen through the function of auxiliary metabolic genes (AMGs). Overall, these findings expand our understanding of deep-sea Planctomycetes bacteria, while highlighting their ability to metabolize nitrogen when reprogrammed by chronic viruses.

Click to read the full paper

基于海洋的负排放技术:一个治理框架评审

Ocean-based Negative Emissions Technologies:

A Governance Framework Review

作者:Lina Röschel and Barbara Neumann

期刊:Frontiers in Marine Science


联合国政府间气候变化专门委员会(IPCC)的模型路径为实时实现全球气候目标提供了指导,尤其是将全球变暖限制在与工业化前水平相比的1.5°C之内的目标,表明需要保护和增强全球碳汇。专家认为,部署所谓的负排放技术对于大规模的二氧化碳去除有潜力,从而使温度符合巴黎协定设定的限制。基于海洋的负排放技术(ONETs)旨在增强海洋中的碳封存和储存,例如通过改变海洋的物理或生物地球化学性质。但除了这些预期效果,ONETs可能还会对海洋的状况以及与之相关的沿海和海洋生态系统服务产生非预期的影响,这些影响与实现一系列全球政策目标有关。本文将八种ONETs对海洋环境的潜在直接和间接、有意和无意的影响与当前全球海洋治理制度下的国际环境协议的法规和政策目标相联系。其结果描绘了ONETs的直接、隐含和间接治理框架。在此,采用(全球)海洋治理概念的更广阔视角,勾勒出一个超越ONETs在海洋治理领域的明确监管的更广泛的网络。这一初步评估确定了现有治理框架中的差距和挑战,以及对技术进行综合治理的需求和机会。确定的是,虽然将ONETs纳入全球气候战略可能被认为是未来实现净零排放目标的必要条件,但在为缓解气候变化部署ONETs时,可能需要考虑或处理与其他政策目标的一系列潜在权衡。此外,面向未来的、适应性的治理机制似乎势在必行,以弥合在不断变化的海洋和海洋中与ONET部署相关的广泛不确定性和未知因素所造成的差距。确定的ONET治理框架重申了当前海洋治理面临的挑战,例如与海洋治理碎片化相关的挑战,但也代表了对未来治理采取协同和综合方法的机会。

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(实习生闻静编译)

Fig. 2 ONET governance framework. The “inner” circle represents direct explicit governance of ONETs and implicit governance of potential impacts of ONETs on ocean condition and climate regulation. The “outer” circle presents indirect governance of ONETs via governance of potentially impacted marine and coastal ecosystem services.

The model pathways of the Intergovernmental Panel for Climate Change (IPCC) for the timely achievement of global climate targets, especially the target of limiting global warming to 1.5°C compared to pre-industrial levels, suggest the need for safeguarding and enhancing the global carbon sink. Experts argue that the deployment of so-called negative emissions technologies for large-scale carbon dioxide removal holds potential for keeping the temperature in line with limits set by the Paris Agreement. Ocean-based negative emissions technologies (ONETs) intend to enhance carbon sequestration and storage in the ocean, e.g., by changing the ocean’s physical or biogeochemical properties. But in addition to these intended effects, ONETs may also cause unintentional impacts on the ocean’s condition and on related coastal and marine ecosystem services that are relevant for the attainment of a range of global policy goals. This article links potential direct and indirect, intentional and unintentional impacts of eight ONETs on the marine environment to the regulations and policy goals of international environmental agreements of the current global ocean governance regime. The results thereof outline a direct, implicit and indirect governance framework of ONETs. Hereby, a broader perspective of the concept of (global) ocean governance is adopted to outline a wider network that goes beyond the explicit regulation of ONETs within the realm of ocean governance. This first-order assessment derives gaps and challenges in the existing governance framework, as well as needs and opportunities for comprehensive governance of the technologies. It is determined that while the inclusion of ONETs in the global climate strategy may be deemed necessary for reaching net zero emission targets in the future, a range of potential trade-offs with other policy goals may need to be considered or dealt with when deploying ONETS for climate mitigation. Further, foresight-oriented and adaptive governance mechanisms appear imperative to bridge gaps resulting from extensive uncertainties and unknowns linked to ONET deployment in a changing ocean and. The identified ONET governance framework reiterates current challenges in ocean governance, for instance related to fragmentation, but also represents an opportunity for a synergistic and integrated approach to future governance.

Click to read the full paper

甲藻的垂直迁移引发强烈赤潮

Dinoflagellate Vertical Migration Fuels an Intense Red Tide

作者:Bofu Zheng, Andrew J. Lucas, Peter J. S. Franks, Tamara L. Schlosser, Clarissa R. Anderson, Uwe Send, Kristen Davis, Andrew D. Barton and Heidi M. Sosik

期刊:Proceedings of the National Academy of Sciences


有害藻华(HABs)正在全球范围内增加,对经济、人类健康和生态系统造成危害。尽管有害藻华频繁发生,但导致其异常高生物量的机制仍不完全清楚。一个50年前的假设认为,一些密集的藻华是由甲藻的运动引起的:生物体白天向上游动进行光合作用,晚上向下游动以获取深层营养物质。这使得甲藻的生长速度超过其非运动性竞争对手。作者使用自主海浪驱动的垂直剖面系统的现场数据验证了这一假设。研究表明,在2020年的赤潮藻华事件中,甲藻Lingulodinium polydra的垂直迁移导致了深层硝酸盐的枯竭。下行迁移在黄昏开始,最大迁移深度由当地硝酸盐浓度决定。深海硝酸盐的损失被等比例增加的浮游植物叶绿素浓度和悬浮颗粒荷载所平衡,从而将垂直迁移与大洋环境中深层硝酸盐的获取和同化联系起来。与70年的气候资料相比,赤潮期间甲藻的垂直迁移造成了异常的生物地球化学条件,表明这些事件能够暂时重塑沿海海洋的生态系统和生物地球化学。通过尖端的观测技术,对形成有害藻华生物的生理、行为和代谢动力学的理解将提高我们预测有害藻华并减轻其未来影响的能力。

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Fig. 3 The 2020 L. polyedra red tide. (A) May 6, 2020 Visible Infrared Imaging Radiometer Suite (VIIRS)—Suomi National Polar-Orbiting Partnership 1-d composite satellite chlorophyll-a (Chl-a) image from the SCB (corresponding to the red box in the Upper Right Inset panel). The Lower Left Inset shows the bathymetric map of the study area (corresponding to the black box in the main panel), with the DM and the WW (red diamond), and the CalCOFI station (Line: 93.3, Station: 26.7) (red square). (B) Images of L. polyedra captured by the IFCB on the DM on May 7, 2020. (C–F) WW-measured time/depth series of temperature, salinity, Chl-a concentration, and nitrate concentration respectively, with isopycnals contoured as gray lines, ranging from 1,024.35 kg m−3 to 1,025.75 kg m−3, with an increment of 0.2 kg m−3. Black bars on the upper boundary of each panel indicate nighttime. Note that only 50-m depth and 7 d of data from the full record are shown here.

Harmful algal blooms (HABs) are increasing globally, causing economic, human health, and ecosystem harm. In spite of the frequent occurrence of HABs, the mechanisms responsible for their exceptionally high biomass remain imperfectly understood. A 50-y-old hypothesis posits that some dense blooms derive from dinoflagellate motility: organisms swim upward during the day to photosynthesize and downward at night to access deep nutrients. This allows dinoflagellates to outgrow their nonmotile competitors. We tested this hypothesis with in situ data from an autonomous, ocean-wave-powered vertical profiling system. We showed that the dinoflagellate Lingulodinium polyedra’s vertical migration led to depletion of deep nitrate during a 2020 red tide HAB event. Downward migration began at dusk, with the maximum migration depth determined by local nitrate concentrations. Losses of nitrate at depth were balanced by proportional increases in phytoplankton chlorophyll concentrations and suspended particle load, conclusively linking vertical migration to the access and assimilation of deep nitrate in the ocean environment. Vertical migration during the red tide created anomalous biogeochemical conditions compared to 70 y of climatological data, demonstrating the capacity of these events to temporarily reshape the coastal ocean’s ecosystem and biogeochemistry. Advances in the understanding of the physiological, behavioral, and metabolic dynamics of HAB-forming organisms from cutting-edge observational techniques will improve our ability to forecast HABs and mitigate their consequences in the future.

Click to read the full paper

海洋海绵标本中捕获的DNA片段揭示了北大西洋深海鱼类的多样性

Trapped DNA Fragments in Marine Sponge Specimens

Unveil North Atlantic Deep-sea Fish Diversity

作者:Erika F. Neave, Wang Cai, Maria Belén Arias, Lynsey R. Harper, Ana Riesgo and Stefano Mariani

期刊:Proceedings of the Royal Society B: Biological Sciences 


海绵通过吸水来进行滤食和扩散性吸氧。在这样做的过程中,会将生活在周围的大量生物体的痕量DNA片段困在他们的组织中。本研究表明,从存档的海绵标本中提取的环境DNA可以重建采样地点的鱼类群落,并根据生物地理区域(从西格陵兰岛到斯瓦尔巴群岛)、栖息地深度(80-1600米)、甚至实施保护的水平来区分北大西洋的鱼类群落组成。考虑到海洋生物多样性调查的成本,作者认为有针对性和机遇性的海绵样本,即已存放在博物馆和其他研究收藏中的样本,代表了一个宝贵的生物多样性信息宝库,可以显著扩展海洋监测的范围。

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Fig. 4 Maps showing locations of sponge specimen retrieval. Depth is indicated by the colour bar and sponge species is indicated by the shape of the points. (a) Map of the North Atlantic study area. (b) Map of the Northeast Atlantic region. (c) Map of the North American Boreal Atlantic region. (d) Map of the Norwegian-Arctic Seas Atlantic region. Sponge specimens in (bd) are jittered for visibility and labelled 1–30 (Northeast Atlantic), 31–49 (North American Boreal) and 50–54 (Norwegian-Arctic Seas).

Sponges pump water to filter feed and for diffusive oxygen uptake. In doing so, trace DNA fragments from a multitude of organisms living around them are trapped in their tissues. Here we show that the environmental DNA retrieved from archived marine sponge specimens can reconstruct the fish communities at the place of sampling and discriminate North Atlantic assemblages according to biogeographic region (from Western Greenland to Svalbard), depth habitat (80–1600 m), and even the level of protection in place. Given the cost associated with ocean biodiversity surveys, we argue that targeted and opportunistic sponge samples – as well as the specimens already stored in museums and other research collections – represent an invaluable trove of biodiversity information that can significantly extend the reach of ocean monitoring.

Click to read the full paper

声明:本版块为尝试性栏目,旨在传播分享最新科研动态。中文翻译仅供参考,中英文若有不符之处,请以英文为准。如有不妥之处,请联系 imber@ecnu.edu.cn 进行订正或要求撤稿。

Disclaimer: This column is a new trial to share cutting-edge research with wider academic community. The Chinese is not an official translation, while the English is invoked from original publication. If there is anything inappropriate, please contact imber@ecnu.edu.cn to correct us or request for a retraction.

各类会议资源

Events, Webinars and Conferences

第二届大三角洲国际会议 将于 2023年11月5至8日 在中国上海举行,请于 2023年9月30日 前提交摘要

Approaching deadline 2nd International Mega–Delta Meeting. 5-8 November 2023, Shanghai, China. Submit an abstract by 30 September 2023

2023年海洋科学大会(OSM)将于 2024年2月18至23日 在美国路易斯安纳州新奥尔良举行,请于 2023年9月13日 前提交摘要和旅行资助申请。欢迎提交摘要至议题OB003:海洋硅循环的评估、修订和新观点

Approaching deadline Ocean Sciences Meeting 2024, 18-23 February 2024, New Orleans, Louisiana. Submit an abstract or apply for a travel scholarship by 13 September 2023. Welcome to submit an abstract to session OB003: Assessments, revisions, and new perspectives for the marine silica cycle

第四届群落生态学国际会议 将于 2023年9月20至22日 在意大利的里雅斯特举行,请于 2023年9月10日 前注册

Approaching deadline 4th International Conference on Community Ecology. 20-22 September 2023, Trieste, Italy. Register by 10 September 2023

2023年全球海洋院所领导人会议 将于 2023年9月25至27日 在中国青岛举行

Global Ocean Summit 2023 (GOS2023), 25-27 September 2023, Qingdao, China



联合国“海洋十年”海洋与气候协作中心(DCC-OCC)国际启动大会 将于 2023年9月27至28日 在中国青岛举行

DCC-OCC International Launching Conference, 27-28 September 2023, Qingdao, China

利用环境DNA方法监测海洋鱼类群落培训班 将于 2023年11月27至29日 在泰国普吉岛举行

Training Workshop on Monitoring Marine Fish Communities with Environmental DNA Method, 27-29 November 2023, Phuket, Thailand

2024年联合国海洋十年大会 将于 2024年4月11至14日 在西班牙巴塞罗那举行

2024 Ocean Decade Conference. 11-14 April 2024, Barcelona, Spain

第二届联合国海洋十年区域会议暨第11届联合国教科文组织政府间海洋学委员会西太平洋分委会(WESTPAC)国际海洋科学大会 将于 2024年4月22至25日 在泰国曼谷举行,请于 2023年11月30日 前提交摘要

2nd UN Ocean Decade Regional Conference in conjunction with the 11th WESTPAC International Marine Science Conference. 22-25 April 2024, Bangkok, Thailand. Submit an abstract by 30 November 2023

发展机会

Jobs and Opportunities

《本格拉洋流公约》招募生态系统咨询服务管理人员,工作地点位于纳米比亚的斯瓦科普蒙德市,请于 9月15日 前提交申请

Manager: Ecosystem Advisory Services, Benguela Current Convention, Swakopmund, Namibia. Apply by 15 September



海洋碳和生物地球化学项目(OCB)征集专题研讨会、工作组和培训活动提案,请于 9月22日 前提交意向

Call for topical workshops, working groups and training activities proposals, OCB. Submit ideas by 22 September 

 


国际蓝碳研究所(IBCI)招募蓝碳研究项目协调人员,工作地点位于新加坡

Coordinator Blue Carbon Research Program. IBCI, Singapore

IMBeR IPO-China信息速递的订阅读者为亚太地区的涉海科研人员,如果您希望在此投放您的招聘需求,请发送邮件至imber@ecnu.edu.cn.
Most our subscribers are IMBeR-related researchers in the Asia-Pacific region. If you would like to put some recruitment information in the IMBeR IPO – China e-News, please contact us through imber@ecnu.edu.cn.

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State Key Laboratory of Estuarine and Coastal Research, East China Normal University
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