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New Projects
Hossein Fani, Ziad Kobti, Alioune Ngom, University of Windsor ($150,000) CFI-JELF. Computing Infrastructure for Deep Learning on Graph-Structured Data.
Hossein Fani, Ziad Kobti, Alioune Ngom, University of Windsor ($51,000) University of Windsor School of Computer Science. Computing Infrastructure for Deep Learning on Graph-Structured Data.
Alioune Ngom, University of Windsor ($175,000) NSERC. Graph Representation Learning Approaches for Computational Drug Repurposing and Bio-Molecular Association Prediction.
Vijendra Sharma, University of Windsor ($195,000) NSERC. Identification of Cell-Type-Specific mRNA Translational Control Mechanisms in Synaptic Plasticity and Memory Formation.
Vijendra Sharma, University of Windsor ($125,000) NSERC Discovery Launch Supplement. Identification of Cell-Type-Specific mRNA Translational Control Mechanisms in Synaptic Plasticity and Memory Formation.
Paul Sudhir, University of Windsor ($105,000) NSERC. Analysis of Discrete Data (Counts-Proportions-Regression Models), Survival Data, and Longitudinal Data with Over Dispersion, Zero Inflation, missing Responses, Missing Covariate Information, Covariate Measurement Error, and Bias Correction.
Andrew Swan, University of Windsor ($200,000) NSERC. Spatial and Temporal Control of Meiosis.
John Trant, University of Windsor ($145,000) NSERC. Cavitands for Molecular Recognition.
Publications / Articles / Presentations
Corchis-Scott R, Beach M, Geng Q, Podadera A, Corchis-Scott O, Norton J, Busch A, Faust R A, McFarlane S, Withington S, Irwin B, Aloosh M, Ng K K S, McKay R M (2024). Wastewater Surveillance to Confirm Differences in Influenza A Infection between Michigan, USA, and Ontario, Canada, September 2022 - March 2023. Emerging Infectious Diseases.
Fernández-Codina A, Nevskaya T, Baron M, Appleton C T, Cecchini M J, Philip A, El-Shimy M, Vanderhoek L, Pinal-Fernández L, Pope J E (2024). Brentuximab vedotin for skin involvement in refractory diffuse cutaneous systemic sclerosis, an open-label trial. Rheumatology (Oxford).
Fifield B-A (2024). Research assistants are vital - so why is their funding so precarious? Times Higher Education.
Fifield B-A, Vusich J, Haberfellner E, Andrechek E R, Porter L A (2024). Atypical cell cycle regulation promotes mammary stem cell expansion during mammary development and tumourigenesis. Breast Cancer Research.
Fontyn S, Bai Y, Bolger S, Greco K, Wang T-F, Hamm C, Cervi A (2024). Inferior vena cava filter use at a large community hospital: a retrospective cohort study. Scientific Reports.
Grafinger O R, Hayward J J, Meng Y, Geddes-McAlister J, Li Y, Mar S, Sheng M, Su B, Thillainadesan G, Lipsman N, Coppolino M G, Trant J F, Jerzak K J, Leong H S (2024). Cancer cell extravasation requires iplectin-mediated delivery of MT1-MMP at invadopodia. British Journal of Cancer.
Hashemi M, Duan L, Rueda L (2024). Probing the Significance of Heterophily on Cell Type Prediction from scRNA-Seq Data by Leveraging Graph Neural Network Models, presented at The Great Lakes Bioinformatics Conference (GLBIO 2024).
Hashemi M, Mustafa S, Ngom A, Rueda L (2024). HeteroGraphNet: Advancing Cell Type Prediction in scRNA-seq with Enhanced Graph Neural Network for Heterophilic Structures, presented at the 32nd Conference on Intelligent Systems for Molecular Biology (ISMB 2024).
Iman K, Mirza M U, Sadia F, Froeyen M, Trant J F, Chaudhary S U (2024). Pharmacophore-Assisted Covalent Docking Identifies a Potential Covalent Inhibitor for Drug-Resistant Genotype 3 Variants of Hepatitis C Viral NS3/4A Serine Protease. Viruses.
Modak S, Abdel-Raheem E, Rueda L (2024). Harnessing the Power of Graph Propagation in Lung nodule Detection, preented at the 22nd International Conference on Artificial Intelligence in Medicine (AIME 2024).
O'Neill T A, Aldana A J, Espinoza J A, Sperry M P, Brykman K M, Donia M B L (2024). Conflict management styles assessment and feedback for student self-awareness and team development. Assessment & Evaluation in Higher Education.
Renaud L J, Mechael S S, Carmichael T B (2024). Coordinating the pore size of paper substrates and aspects ratio. ofsilver nanowires to improve printed electronics. Flexible and Printed Electronics.
Ross L, Hansen D, Proudman S, Khanna D, Herrick A L, Stevens W, Australian Scleroderma Interest Group, Canadian Scleroderma Research Group, Baron M, Nikpour M, SCTC Activity Index Working Group (Collaborator - Fernández-Codina A) (2024). Development and Initial Validation of the Novel Scleroderma Clinical Trials Consortium Activity Index. Arthritis & Rheumatology.
Sagar S, Freer J, Ornstein T, Miller C (2024). Equal Access? Comparing Accommodation and Treatment Experiences of Racialized University Students with Attention Problems and Their White Peers. Journal of Critical Race, Indigeneity, and Decolonization.
Shaikh A, Khanna D, Rueda L (2024). Exploring Protein Structure Dynamics through Graph-Based Attention and Voronoi Tessellation Saliency Mapping, presented at the 32nd Conference on Intelligent Systems for Molecular Biology (ISMB 2024).
Soltani M, Rueda L (2024). Hypergraph Neural Networks Reveal Cell-cell Interactions in Spatial Domain, presented at the 32nd Conference on Intelligent Systems for Molecular Biology (ISMB 2024).
Vasighizaker A, Hora S, Zeng R, Rueda L (2024). SEGCECO: Subgraph Embedding of Gene expression matrix prediction of CEll-cell COmmunication, presented at the 32nd Conference on Intelligent Systems for Molecular Biology (ISMB 2024).
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